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Data Status

Contents

  1. New Data
  2. Curated Data Statistics
  3. Integrated Data

Top Top of page New Data

Our data was updated July 12, 2010—significantly for these chemicals, diseases and genes:

decamethrin fexofenadine Isoproterenol Lithium Lithium Chloride Leukotriene D4 Methamphetamine Permethrin Terfenadine Valproic Acid valsartan zafirlukast
Angioedema Asthma Asthma, Exercise-Induced Bipolar Disorder Carcinoma, Squamous Cell Cardiovascular Diseases Hypertension Kidney Diseases Liver Neoplasms, Experimental Long QT Syndrome Papilloma Proteinuria Skin Neoplasms Tachycardia, Ventricular Urticaria
ABCB1 AGT AKT1 BCL2 BDNF CASP3 CTNNB1 CYSLTR1 CYSLTR2 GSK3B IL18 KCNH2 TNF

We're always adding new features, too.

Top Top of page Curated Data Statistics

CTD contains the following curated relationships from 21,668 references:

  Total Latest release
Chemical–gene interactions 240,369 2,156
Unique chemicals 5,931 187
Unique genes 17,321 1,097
Unique organisms 327 14
Unique references 17,926 168
Gene–disease relationships 898,177 17,479
Direct[1] 11,573 20
  Unique genes 4,997 19
  Unique diseases 3,818 13
Inferred[2] 886,604 17,459
  Unique genes 16,778 7,271
  Unique diseases 929 75
Chemical–disease relationships 255,126 675
Direct[1] 8,523 183
  Unique chemicals 1,972 74
  Unique diseases 951 78
Inferred[2] 246,603 492
  Unique chemicals 5,324 384
  Unique diseases 3,006 13
[1]
Direct relationships are established by CTD (chemical–disease and gene–disease) and OMIM (gene–disease) curation.
[2]
Inferred relationships are established via CTD–curated chemical–gene interactions (e.g., Chemical A is associated with Disease B because Chemical A has a curated interaction with Gene C, and Gene C has a direct relationship with Disease B).

Top Top of page Integrated Data

CTD integrates the following external data:

Database Release Integration Date
ChemIDplus®   Jul 5, 2010
DrugBank   Jul 6, 2010
Gene Ontology Consortium   Jul 5, 2010
Kyoto Encyclopedia of Genes and Genomes   Jul 5, 2010
NCBI Gene   Jul 5, 2010
NCBI PubMed®   Jul 6, 2010
NCBI Taxonomy   Jul 5, 2010
NLM® Medical Subject Headings® 2010 MeSH  Jul 5, 2010
Reactome   Jul 5, 2010